If you interpret my words as an indication that the control screen and the subject screen should have the same refresh rate, it is a misunderstanding. Although NIMH ML renders the same graphic on both screens, only the subject screen is updated in synchrony with the refresh rate. The control screen is not. Therefore, they do not need to have the same refresh rate.
The reason that your current configuration works is because you set a different monitor as the main display, as suggested in the manual. You can still use the 60-Hz monitor as your control screen, after changing the main display. Just drag the main menu window of NIMH ML onto the 60-Hz monitor and run tasks from there.
https://monkeylogic.nimh.nih.gov/docs_MonitorSetup.htmlThe other half of my words that you did not quote is
"... so that Monitor 3 may not be needed", so it was actually a suggestion that you should get rid of the copy monitor. You need to be careful about duplicating the subject screen without a video splitter. The subject screen runs in the so-called exclusive mode and can be created only for one monitor. It has not been tested how the duplication of the subject screen on the video card level will affect the performance. I would carefully verify whether it really runs at 144 Hz and is not interfered by the 60-Hz copy in any way.